Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKILFIGDVVGSIGRDAITEYLPQLKKKYKPTITVINGENAASGRGITEKIYKDFLELGANAVTLGNHTWDNRDIFEFIDEAKYLVRPANFPDDTT-----PGTGMVFVKSNQHEIAVINMQGRTFLADLD--DPFRKMDYLIEEAKKRTNIIFVDFHAETTSEKEAMGWYLDGRVTAVVGTHTHVQTSDNRILPEGTAYLTDTGMTGP-YDAILGMEKEAVIRRFKTALPTRFEVPKTGRAVLSGCLITLDESTGKAQKIDRILINEDHPFSFD |
| 1T71 Chain:A ((5-270)) | IKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGVNYITMGNHTWFQKLDLAVVINKKDLVRPLNL--DTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELI--LKRDCDLHIVDFHAETTSEKNAFCMAFDGYVTTIFGTHTHVPSADLRITPKGSAYITDVGMCGPGFGSVIGANPEQSIRLFCAGSREHFEVSKCG-AQLNGVFFEVDVNTKKVIKTEAIRIVEDDP---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T71.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129389 for 2237 contacts (-57.8/contact) +
2D Compatibility (PS) -28106 + (NN) -14891 + (LL) 252
1D Compatibility (HY) -18800 + (ID) 5350
Total energy: -196284.0 ( -87.74 by residue)
QMean score : 0.634
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