Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LNERIFRENTRPVQVGNLTIGGSEELTIQSMTTTKTHDVEATVAEIHRLEEAGCQIVRVACPDERAANALSAIKKKI-----HIPLVADIHFDYRLALK---AIDAGVDKIRINPGNIGR-RDRVE---KVVNAAKAKNIPIRIGVNAGSLEKKIIQ-------KYGYPTA------DGMVESAL-AHIKILE-DLDFYDIIVSLKASDVNLAIEAYDKASRAFNYPLHLGITESGTQFAGGIKSAAGLGAILSLGIGNTLRVSLSADPVE----EIKVAREVLKSFGLSSNAAMLISCPTCGRIEIDLIR-IANEVENYIAKIEVP-----------IKVAVLGCAVNGPGEAREADIGI----AGSNGEGLLFRHGKIIRKVPEAIMIDELKKEIDILAEEFFVKKIDLESLR |
| 4S38 Chain:A ((4-378)) | -----MRRPTPTVYVGRVPIGGAHPIAVQSMTNTPTRDVEATTAQVLELHRAGSEIVRLTVNDEEAAKAVPEIKRRLLAEGAEVPLVGDFHFNGHLLLRKYPKMAEALD-FRINPGTLGRGRHKDEHFAEMIRIAMDLGKPVRIGANWGSLDPALLTELMDRNARRPEPKSAHEVVLEALVESAVRAYEAALEMGLGEDKLVLSAKVSKARDLVWVYRELARRTQAPLHLGLTEAGMGVKGIVASAAALAPLLLEGIGDTIRVSLTPAPGEPRTKEVEVAQEILQALGLRAFAPEVTSCPGCGRTTSTFFQELAEEVSRRL-KERLPEWRARYPGVEELKVAVMGCVVNGPGESKHAHIGISLPGAGEEPKAPVYADGKLL---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4S38.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169358 for 2615 contacts (-64.8/contact) +
2D Compatibility (PS) -36759 + (NN) -26001 + (LL) 4328
1D Compatibility (HY) -24000 + (ID) 6850
Total energy: -258640.0 ( -98.91 by residue)
QMean score : 0.487
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