Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LTKLKKVMISVIAATLLLLAGCGSSAVIKTDAGSVTQDELYEAMKTTYGNEVVQQLTFKKILEDKYTVTEKEVNAEYKKYEEQYGDSFESTLSSNNLTKTSFKENLEYNLLVQKATEANMDVSESKLKAYYKTWEPDITVRHILVDDEATAKEIQTKLKNGEKFTDLAKEYSTDTATSTNGGLLDPFGPGEMDETFEKAAYALENKDDVSGI---------VKSTYGYHLIQLVKKTEKGTYAKEKANVKAAYIKSQLTSENMTAALKKELKAANIDIKDSDLKDAFADYTSTSSTSSTTTSN |
3UI6 Chain:A ((8-97)) | -----------------------------------------------------------------------------------------------------------------------------------------VKVRHILCEKHGKIMEAMEKLKSGMRFNEVAAQYSEDKA--RQGGDLGWMTRGSMVGPFQEAAFAL----PVSGMDKPVFTDPPVKTKFGYHIIMV---------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UI6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -41968 for 593 contacts (-70.8/contact) +
2D Compatibility (PS) -9190 + (NN) -8264 + (LL) 15020
1D Compatibility (HY) -8400 + (ID) 1750
Total energy: -54552.0 ( -91.99 by residue)
QMean score : 0.767
|
|
|