Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLTATEALMKMKEKGYKHTDKREFLINLLARKNKYLTAKDVLENMKDDFPGISFDTIYRNLSLFVELGIFEETDL----SGERNFRLACTHEHHHHHFICMKCGKTKEIMMCPMDFLTEALP---GYQIDGHKFEVYGECPECLQAS
3MWM Chain:A ((11-136))
-----------------RATRQRAAVSAALQEVEEFRSAQELHDMLKHKGDAVGLTTVYRTLQSLADAG---EVDVLRTAEGESVYRR-CSTGDHHHHLVCRACGKAVEVEGPAVEKWAEAIAAEHGYVNVAHTVEIFGTCADCAGA-
General information:
TITO was launched using:
RESULT:
Template:
3MWM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43822 for 762 contacts (-57.5/contact) +
2D Compatibility (PS) -12479 + (NN) 1816 + (LL) 2072
1D Compatibility (HY) -4400 + (ID) 1750
Total energy: -58563.0 ( -76.85 by residue)
QMean score : 0.458
(partial model without unconserved sides chains):
PDB file :
Tito_3MWM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MWM-query.scw
PDB file :
Tito_Scwrl_3MWM.pdb
: