Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRLGSHVSMSGKKMLLGASEEAASYGSNTFMIYTGAPQNTRRKPIEELNIEAGLEHMKAHDMADIVVHAPYIINIGNSVKPETFELGVNFLQSEIERTRALGAKQIVLHPGAHVGEGADKGIKQIIQGLNEALIHDQDVQIALETMAGKGSECGRTFEELAQIIDGVTHNELLSVTFDTCHTHDAGYDIVNDFDGVLNQFDKIVGIDRLKVLHINDSKNERGAHKDRHANIGFGHIGFDALHYIVHHPQLADVPKILETPYVGGDKASKKAPYKWEIAMLKNGEFDPDLLNKIQNS |
| 3AAM Chain:A ((2-250)) | -PRYGFHLSIAGKKGVAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGGLPAVIHASYLVNLG--AEGELWEKSVASLADDLEKAALLGVEYVVVHPGSGRPERVKEGA---LKALRLAGVRSRPVLL-VENTAGGGEKVGARFEELAWLV----ADTPLQVCLDTCHAYAAGYDVAEDPLGVLDALDRAVGLERVPVVHLNDSVGGLGSRVDHHAHLLQGKIG-EGLKRVFLDPRLKDRVFILETP------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3AAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -139855 for 2167 contacts (-64.5/contact) +
2D Compatibility (PS) -26616 + (NN) -8624 + (LL) 2392
1D Compatibility (HY) -14000 + (ID) 4550
Total energy: -191253.0 ( -88.26 by residue)
QMean score : 0.547
|
|
|