Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKTVVRKNESLEDALRRFKRTVSKSGTLQESRKREFYEKPSVKRKKKSEAARKRKF
3J6V Chain:U ((8-64))
IARTVMVQEGNVEGAYRTLNRILTMDGLIEDIKRRRYYEKPCRRRQRESYETCRRIY
General information:
TITO was launched using:
RESULT:
Template:
3J6V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12442 for 198 contacts (62.8/contact) +
2D Compatibility (PS) -5613 + (NN) 2004 + (LL) 0
1D Compatibility (HY) -4000 + (ID) 750
Total energy: 4083.0 ( 20.62 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_3J6V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J6V-query.scw
PDB file :
Tito_Scwrl_3J6V.pdb
: