Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VNDIIHDYLLKNIPKSSPFFKELEAYAKENEVPIMEPDSLYCLLQILDIQKPKRILELGTAIGYSALKMADKLPD-AEIITVERDEERYEQAIHNIQRYGASDRVKVLLTDAIEGAEEILAHGPFDAIFIDAAKAQYEKFFHIYTVSLAENGVIYSDNVLFKGLALDMTPEKQRKLRVARKMRHFNDFLVTHPDFETTTIPLGDGLSISKRKKTGGVS
4OA8 Chain:A ((48-223))
------------------------------QLGTVEGQMLQLLIRMAGIHS---IVEVGTCVGFSAICMAHALPSKGHIYTIEKDYENVVTANQNIVNCKLEDKITVLHGEALAQLNTLKEMAPFDMIFIDANKSSYLAYLNWAKMYIRKGGLIVADNTFLFGSVFDEHPTEKVSSNAHASMRAFNDELANKEKYLSTIIPTSEGMMVS---------
General information:
TITO was launched using:
RESULT:
Template:
4OA8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91415 for 1407 contacts (-65.0/contact) +
2D Compatibility (PS) -19054 + (NN) -9448 + (LL) 2140
1D Compatibility (HY) -14000 + (ID) 2750
Total energy: -134527.0 ( -95.61 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_4OA8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OA8-query.scw
PDB file :
Tito_Scwrl_4OA8.pdb
: