Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENRIYLDHAATSPIHPEVIQTMLGAITNTYGNPSSIHYAGREARKALDEARHTIAKSIHATEKEIIFTSGGTEGDNLALIGTALAHKENGTHIITSQIEHHAVLKTCEYLETQGFEVTYLPVDEHGIVSVESVQAALRPETILVSIMYGNNEIGSIQPIAEIGALLRDQQAIFHTDAVQAYGLLNINVMELGVDLLTTSSHKINGPRGVGFLYVKNGTRLAYQMHGGEQERKRRAGTENLAGICGFSAASSIMTNERELKNEEYISFKKRMAEIWRSAELDFEVNGLEADTLPHVFSVRFPGVSIEQLLMNLDMEGIAVSSGSACTAGTVDPSHVLVALFGENHPAIQETVRISFGLGNHLEEVEMAATKISEVVTRLMKI |
| 4HVK Chain:A ((3-373)) | -----YFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESY-LNGHPEKRLPNNVNVRFSYIEGESIVLSLDMAGIQASTG--------QPSHVLMAC-GLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180616 for 3354 contacts (-53.9/contact) +
2D Compatibility (PS) -40089 + (NN) -17912 + (LL) 1820
1D Compatibility (HY) -28400 + (ID) 6900
Total energy: -272097.0 ( -81.13 by residue)
QMean score : 0.559
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