Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKITTKGRYGLTITLELAKRIGDGPISLRSIAQDKNLSEHYLEQLIGPLRNAGIVKSIRGAHGGYVLNGDPEKITAGDIIRTLEGPIVLVESMEDEE------AAQRELWTRMRNAVRDVLDQTTLADLLKHSTDSELTDGYMFYI
4CIC Chain:A ((5-153))
LKVSTKGHYGVQAMFDLAQHFGEGPVSLKSIAERQGLSEPYLEQLIAVLRKAGLVKSVRGAQGGYILAREPRDIKVGDIIRVLEG------------SLKFDFSVTKSVWEKVKKSIEEVLDSITLADMLKDAEEAQMAQGYMYYI
General information:
TITO was launched using:
RESULT:
Template:
4CIC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60735 for 833 contacts (-72.9/contact) +
2D Compatibility (PS) -13809 + (NN) -5217 + (LL) 1144
1D Compatibility (HY) -16000 + (ID) 3200
Total energy: -97817.0 ( -117.43 by residue)
QMean score : 0.653
(partial model without unconserved sides chains):
PDB file :
Tito_4CIC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CIC-query.scw
PDB file :
Tito_Scwrl_4CIC.pdb
: