Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELIKGNIASPKGFYADGKHAGLKRKRNDIGWIYSEVPANAAAVYTMNQMQAAPIFVTKDSFQSNAKLQAIIVNSGNANACTGNQGMLDALAMRAQTAEKLEIPLDSVAVASTGIIGDMLPMDKINAGIEMLEKQTGNAADFEEAILTTDTFQKQISFQTEIGGRKVTMSGVAKGSGMIHPNMATMLAFITTDAAI-PAELLQKLLKIKVDKTFNQITVDGDTSTNDMVVVMANGCAENPMLQEGTADFAKFADMFQAVTEHLAKSIARDGEGATKLIEVQVNGATKTEDARMIAKKIVSSSLVKTAAFGGDGNWGRIICAIGYSGGRFAPD--NITIKIGGIEILNHSSQTIYNQQALDA----YLEEEHIIIEVDLHIGLESGTAWGCDLSYEYVKINACYRT |
| 2VZK Chain:B ((1-213)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLLTFFATDARLDPAEQ-DRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANGLA-------GEVDAGEFEEALHTAALALVKDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVNSPLVKTAVHGCDPNWGRVAMAIGKCSDDTDIDQERVTIRFGEVEVYPPKARGDQADDALRAAVAEHLRGDEVVIGIDLAIADGAFTVYGCDLTEGYVRLNSEYTT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VZK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110729 for 1525 contacts (-72.6/contact) +
2D Compatibility (PS) -22753 + (NN) -13375 + (LL) 12736
1D Compatibility (HY) -14000 + (ID) 4350
Total energy: -152471.0 ( -99.98 by residue)
QMean score : 0.416
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