Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVSIIGATGYGGLELIRLLHQHSSVDIATLHSFSAQA----ETLATFYPHLKDLAVSPLEKINPT-EIIEKSDTVFIATPSGIAKDIALPYVDAGLNVIDLSGDFRLKDRQLYEKWYGKSAAPTEYIGKAEYGLAEFREKKETT--FIANPGCYATATLLGLAPLATNKLIDPTSI-IVDAKSGISGAGKVPSASTHFTETNENMTLYKMNSHQHIPEIMQQLTKWDESIPAIQFSTSLIPITRGIFTTIYVKPKNPITQKELHKLYESTYDNAPFVRIQPENVYPTVKQVTASNYCDIGLAYNEKTNVITIVSVIDNLVKGAAGQAIQNLNIMANFAESDGLRFIPVYP |
| 2G17 Chain:A ((9-336)) | ----IVGASGYAGAELVSYVNRHPHMTITAL-TVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDVRDFSADVDVVFLATAHEVSHDLAPQFLQAGCVVFDLSGAFRVNDRAFYEKYYGFTHQYPELLEQAVYGLAEWNVDKLNTANLIAVPGCYPTAAQLSLKPLIDGGLLDLTQWPVINATSGVSGAGRKAAISNSFCEV--SLQPYGVFTHRHQPEIAVHLGA------EVIFTPHLGNFPRGILETITCRLKAGVTHAQVADVLQKAYGDKPLVRLYDKGV-PALKNVVGLPFCDIGFAVQGEH--LIVVATEDNLLKGAAAQAVQCANIRFGFAETQSL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2G17.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190807 for 2775 contacts (-68.8/contact) +
2D Compatibility (PS) -34176 + (NN) -12936 + (LL) 1368
1D Compatibility (HY) -30400 + (ID) 6100
Total energy: -273051.0 ( -98.40 by residue)
QMean score : 0.484
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