Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFLEEILAQKEVEVAKMPLEQVAEKRKTYSFYEFLKANTNTMQLIAEVKRASPSKGEINMGVNPVLQAKSYQAAGAGMISVLTDPVFFKGSIEDLREVAKNVGIPVLCKDFIISEKQLIRARNAGATVVLLIISALTEEKLITLFEQALALDLEVLVEVHDQEELAVAQKIGAQLIGVNNRNLHTFEVDIAVSERLASDFSSDACFISESGFR-TAEDVARVSQKYDAVLVGEALMREATPEVAAKSLKVTR
4FB7 Chain:A ((55-261))
------------------------------------------IGVIAEVKRASPSAGALATIADPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARDLMTLDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTSGDPRAAVADL----
General information:
TITO was launched using:
RESULT:
Template:
4FB7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121899 for 1769 contacts (-68.9/contact) +
2D Compatibility (PS) -22509 + (NN) -10169 + (LL) 4732
1D Compatibility (HY) -15600 + (ID) 4350
Total energy: -169795.0 ( -95.98 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_4FB7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FB7-query.scw
PDB file :
Tito_Scwrl_4FB7.pdb
: