Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VIPAKLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGFNSNQLLPYLDYDLISENPKILCGFSDITALATAIYTQTELITYSG-AHFSSFS-MEKGLDYVMESFSDCLLQKE--PFALKESATWSDD--EWYLDQENRNFIPNEGLVVMQPGVAEGIIIGGNLCTLNLLQGTEYMPNLA-GTILFIED---DFMTIPETFDRDLESLLSQPGA-DEIEGMVIGRFQQKTAMTAEKLAY-IIETKTALQKIPVISGADFGHTQPIATFPIGGTARID-TNQTDKIQIIRH |
| 3TYX Chain:A ((6-330)) | -LPKSLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIGGMNSNSLLPYIDYDAFQNNPKIMIGYSDATALLLGIYAKTGIPTFYGPALVPSFGEFEPFVDDTYKYFLETLLHDQALPYNIKQPLFWSDESINWEEKTKEKELRPNNWISVTN-GQATGRVIGGNLNTIQGIWGSPYMPCIQEGDILFIEDSSKDAATIERSF-----SFLKINGVFDKVSGIILGKHEQFDDCGTNRKPYEILLEVLQNQRIPLLADFDCCHTHPMITMPIGVQVKMDATNKTIHI----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TYX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188690 for 2756 contacts (-68.5/contact) +
2D Compatibility (PS) -32198 + (NN) -4081 + (LL) 952
1D Compatibility (HY) -22400 + (ID) 5800
Total energy: -252217.0 ( -91.52 by residue)
QMean score : 0.502
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