Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIMLVCSAGMSTSLLVKKMTEAIEKQQVDATVIAVAEADFDKYKGNVDVVLLAPQVRFLEKNLKRVLDPLGIPVAIINGIDYGTMDGEKVLNDALAMIEK
1E2B Chain:A ((5-93))
--HIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQIAYMLPEIQRLLP--NKPVEVIDSLLYGKVDGLGVL---------
General information:
TITO was launched using:
RESULT:
Template:
1E2B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77179 for 717 contacts (-107.6/contact) +
2D Compatibility (PS) -9968 + (NN) -7608 + (LL) 1052
1D Compatibility (HY) -9200 + (ID) 1900
Total energy: -104803.0 ( -146.17 by residue)
QMean score : 0.432
(partial model without unconserved sides chains):
PDB file :
Tito_1E2B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E2B-query.scw
PDB file :
Tito_Scwrl_1E2B.pdb
: