Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPAVIGVIMGSTSDWDTMKKACDVLDELEIAYEKKVVSAHRTPDLMFQYAEQARERGLKIIIAGAGGAAHLPGMVAAKTTLPVIGVPIKSKALNGMDSLLSIVQMPGGVPVATVAIGESGAVNAGLLAAQILSITDDAITNRLQKRRATLEETVLESSDYLG
3OOW Chain:A ((8-162))
----VGVIMGSKSDWSTMKECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKERGLKVIIAGAGGAAHLPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASILQHTDINIAKALAEFRAEQTRFVLENPD---
General information:
TITO was launched using:
RESULT:
Template:
3OOW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119214 for 1272 contacts (-93.7/contact) +
2D Compatibility (PS) -16912 + (NN) -6412 + (LL) 500
1D Compatibility (HY) -16800 + (ID) 5400
Total energy: -164238.0 ( -129.12 by residue)
QMean score : 0.657
(partial model without unconserved sides chains):
PDB file :
Tito_3OOW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OOW-query.scw
PDB file :
Tito_Scwrl_3OOW.pdb
: