Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQEEIIIAAQKWMQSHFEKETTGHDWEHIKRVWHLSKQIQVTEGGDKFAIELAALFHDYNDSKLTEDPLQATEIITTWLREKEIPEDVISKIIRIIQAVSFKNGKNPIQASTIEEKI-VQDADRLDAIGAIGIARTFTYGGAHNREIANRDHPENTTLQHFYDKLLLIQTQLKTKTGRELAGEKQIIMQDFIHALEKELKI |
2O08 Chain:A ((16-107)) | ----------------------TEHRYQHTIGVMETAIDLAKLYGADQQKAELAAIFHDYAKFRDKNE-------MRTLIREKLSQQDILFYGDELLHA--------PCGAYYVREEVGIEDEDVLQAI------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O08.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10167 for 590 contacts (-17.2/contact) +
2D Compatibility (PS) -9619 + (NN) -1447 + (LL) 8992
1D Compatibility (HY) -4800 + (ID) 1400
Total energy: -18441.0 ( -31.26 by residue)
QMean score : 0.424
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