Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEELLKRFTKYVKVDTQSNEESTVCPTTPGQMELANILVTELKEIGMQEVTVDE------FGYVMATLPSNST--KEVPVIGFLAHLDTATDLTGKNVQPQVHENYDGKDIILNKDLNVVLSPKQFPELAGYKGKTLITTDGTTLLGADDKAGITEIMVAMNHLINHPEIKHGKIRIAFTPDEEIGR-GPERFDVEAFGAKYAYTMD----------GGPLGELEYESFNAASAKITFKGNSVHPGTAKNKMVNAVKMAMEFDARIPKDEAPEYTEGYEGFYHLISLNGDVEQARSYYII-----RDFDHLKFVERKTHIASIAKELEEKYGEGSVELKLNDQYYNMREKIEPVKEIVDIVSAAMRNLDIEPKISPIRGGTDGAQLSYKGLPTPNIFGGGENFHGKFEYVALESMVKATEVIIEVARLFEEKE |
| 3RZA Chain:A ((23-394)) | -EQRLLNTFLELVQIDSETGNESTIQP----------ILKEKFIALGL-DVKEDEAAKHPKLGANNLVCTMNSTIE--VPKLYLTSHMDTV--VPAINVKPIVKDD-------------------------GY-----IYSDGTTILGADDKAGLAAMLEVL-QVIKEQQIPHGQIQFVITVGEESGLIGAKELNSELLDADFGYAIDASADVGTTVVGAPTQML-------ISAKII--GKTAHASTPK-EGVSAINIAAKAISRMKLGQVDEITTANIGKFH----GGSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELG-GKAEVTVEQSYPGF--KINDNEAVVKIAQESARNLGLSANTIISGGGSDGSIINTFGIPSVILGVGYEKIHTTNERMPIKSLNLLASQVLEIIKIVARQ- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -89648 for 2935 contacts (-30.5/contact) +
2D Compatibility (PS) -37361 + (NN) -17257 + (LL) 3976
1D Compatibility (HY) -15600 + (ID) 5200
Total energy: -161090.0 ( -54.89 by residue)
QMean score : 0.490
|
|
|