Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ISKDMLVNDGIRAREVRLIDQDGEQLGVKSKIDALQIAEKANL-------DLVLVAP--TAKPPVARIMDYGKFRFEQQKKDKE----ARKNQKVIVMKEVRLSPTIDEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRSMFLVLAPLHEK |
1GAX Chain:A ((741-821)) | ------------AQEVR-VYLEGETAPVEENLEVFRFLSRADLLPERPAKALVKAMPRVTARMPLEGLLDVEEWRRRQEKRLKELLALAERSQR------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GAX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5215 for 332 contacts (15.7/contact) +
2D Compatibility (PS) -6977 + (NN) 1021 + (LL) 7920
1D Compatibility (HY) -4000 + (ID) 1150
Total energy: 2029.0 ( 6.11 by residue)
QMean score : 0.174
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