Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVLQTEMKVIQQTEIADKVYELILTGECVAGMS-PGQFLMLKPSRSDLLMRRPISICSYDKTAKTCILLYRVEGDGTRDFSKLSEGDTI-DVLGPLGKGFDIDTTPAPKTALLIGGGIGVPPMYQLGKELAEKGVQVMFVNGFQSAKDSFYAQEMAEYGTVHIATVDGSLGTQGFVTD-ITKNFPEEP-DVIYSCGPKAMLQ--AVKASFPETKTYLSLEERMACGIGACYACVCPKADDTNKQFK-VCEDGPVFRADEVKL
4YRY Chain:A ((8-251))------EIVKKVKIAEDVFDFWIHSPSVSKEARPGQFVVIRLHEKG--ERIPLTVADTKPEEGLFRMVVKVVGKTTHELSLKKEGDTILDVVGPLGNPSEIENY---GNVLLVGGGVGIATLYPIAKALKEAGNNITTVLGARTKDYLIMVDEFKEISDVLLVTDDGSAGMKGVVTDAMDKLFRERKFDICWAVGPTIMMKFCTLKAREFGVPIWVSLNPIMVDGTGMCGACRVT----VSGQIKFACVDGPEFRGEEV--


General information:
TITO was launched using:
RESULT:

Template: 4YRY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146933 for 1968 contacts (-74.7/contact) +
2D Compatibility (PS) -25260 + (NN) -7330 + (LL) 1364
1D Compatibility (HY) -17600 + (ID) 3900
Total energy: -199659.0 ( -101.45 by residue)
QMean score : 0.489

(partial model without unconserved sides chains):
PDB file : Tito_4YRY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YRY-query.scw
PDB file : Tito_Scwrl_4YRY.pdb: