Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTPSMEDYIEKIYSLIETKGYARVSDIADELFVHPSSVTKMVQKLDKDEYLIYEKYRGLILTPKGTQMGKRLLERHALLESFLSIIGVDPSHIYHDVEGIEHHLSWNSIDRIGDVVQFFENHPDALKTLKAMETTKPETKE
2F5C Chain:A ((3-134))
--TPSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDEYLIYEKYRGLVLTSKGKKIGKRLVYRHELLEQFLRIIGVDEEKIYNDVEGIEHHLSWNSIDRIGDLVQYFEEDDARKKDLKSIQ--------
General information:
TITO was launched using:
RESULT:
Template:
2F5C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74457 for 893 contacts (-83.4/contact) +
2D Compatibility (PS) -13793 + (NN) -130 + (LL) 420
1D Compatibility (HY) -18400 + (ID) 5000
Total energy: -111360.0 ( -124.70 by residue)
QMean score : 0.570
(partial model without unconserved sides chains):
PDB file :
Tito_2F5C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F5C-query.scw
PDB file :
Tito_Scwrl_2F5C.pdb
: