Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVFVDGASAGNPGPSGAGIVLKADGIYEQFAIPLAVMTNHEAEFIAIKLGLEEALKKQATLIRLYSDS----KVAIEAIH---KRHAKNPLFKP--HLDAILEMADSLELFFAEWRNVS------QNKQADQLARQAIKKQKQPGVK
2Z1J Chain:A ((5-145))
VEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYERTTNNRMELMAAIVAL-EALKEHCEVI-LSTDSHYVRKGITEWIHNWKKRGWKKADKKPVKNVDLWKRLDAALGRHKIKWEWVKGHAGHPENERCDELARAAAMKPK-----
General information:
TITO was launched using:
RESULT:
Template:
2Z1J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50577 for 943 contacts (-53.6/contact) +
2D Compatibility (PS) -13605 + (NN) -6967 + (LL) 268
1D Compatibility (HY) -2000 + (ID) 2400
Total energy: -75281.0 ( -79.83 by residue)
QMean score : 0.493
(partial model without unconserved sides chains):
PDB file :
Tito_2Z1J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z1J-query.scw
PDB file :
Tito_Scwrl_2Z1J.pdb
: