Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYLCENENAYRRRNSGNLEIEMSEITLRNRKPKRKIGKWIAIILGIIIVLVVAAFLYFRYAEKPVTNAETEALDRISGQVDLKTTDQFYLYNGPKEVYYVLTGKNSKNKNIIVWVPKKKSDKVYVKFASDGITEQQARD-----KVTKEKKPKKILHVNLGMEKETPIWEVAYLDKNDKLNYFDINFETGEWYREIENL |
| 3ZFM Chain:A ((42-133)) | ------------------------------------------------------------------------------------------------------------------LPGKREIFVAIKTL----TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSF---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6272 for 252 contacts (-24.9/contact) +
2D Compatibility (PS) -6421 + (NN) -1799 + (LL) 10056
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -8836.0 ( -35.06 by residue)
QMean score : 0.297
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