Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNNREKLLALFTESDGTYLSGQEIADSLGCSRTAVWKQMEALRKEGFEIEAVRNRGYRLS--------ATAEQYTKDALLLGLETKFIGQHLEVHESVNSTQIIAHQQIETSPEGTVIVADEQTAGKGRLLRPWSSKKGEGIWMSVILKPQIPIQKVPQFTFIASLAITEAIENITKLEPKIKWPNDIYIGKRKICGVLTEMQAEAETIHAVIIGMGINVNQQ--EFPEEIKDKASSLKLELGESVSRKALLQEILTSLEKYYELFLDKGFAPIKLLWETKAIPFGEKLTASTTKGKIHGQVKGISDEGVLLLQDTLGEVHSIYSADILLDNEK |
4HA8 Chain:A ((11-326)) | -----QDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLKLEGCKIDSVNHKGHLLQQLPDIWYQGIIDQYTKSSALFDFS--------EVYDSIDSTQLAAKKSLVGNQSSFFILSDEQTKGRGRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALGIRDAIQHFSQDEVKVKWPNDIYIDNGKVCGFLTEMVANNDGIEAIICGIGINLTQQLENFDESIRHRATSIQLHDKNKLDRYQFLERLLQEIEKRYNQFLTLPFSEIREEYNAASNIWNRTLLFTENDKQFKGQAIDLDYDGYLIVRDEAGESHRLISADI------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HA8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160763 for 2400 contacts (-67.0/contact) +
2D Compatibility (PS) -32893 + (NN) -10852 + (LL) 1196
1D Compatibility (HY) -29600 + (ID) 5850
Total energy: -238762.0 ( -99.48 by residue)
QMean score : 0.451
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