Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LFELVNSYIDSLALFLAILFIQGMSFRKIRQYRPNWFQNGSRRLFLSILLGVYYGLAGIYFIYEGAYENNPVIYTNMRILILMVTSVFGGRIPLIFAYLVMLFGRISFDIASPTTSRYVILMTLIFAACLLVTFWKKQRFSRFVALIILNFPAILYYFVNNFDEGRILRGFEIIEYFLLFFVTALLVFYACNYIDKSNLVIQNLTETAMTDSLTNLPNMRFFTQQFGWIFTKSQKRKKSLSLFIIDIDHFKEINDFHGHQAGNTVLAQFSSILKN--RTFPPRTMFARIGGEEFAVLLQNVGTEQAALIADFFREEVERAKFPYNPASGK----VTVSIGVASASSNFSTTESLFEAADQALYQAKQNGRNQIAVHQGELE |
| 1W25 Chain:A ((286-448)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAI---DLPCRYGGEEFVVIMPDTALADALRIAERIRMHV--SGSPFTVAHGREMLNVTISIGVSATAGEGDTPEALLKRADEGVYQAKASGRNAV-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102095 for 1178 contacts (-86.7/contact) +
2D Compatibility (PS) -17305 + (NN) -7924 + (LL) 20048
1D Compatibility (HY) -11200 + (ID) 3100
Total energy: -121576.0 ( -103.21 by residue)
QMean score : 0.515
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