Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYDVIVIGGGPSGLMAAISAAEKNKRVLLIEKGPKLGRKLIMSGGGRCNVTNRRPAEEIIKHIPGNGRFLYSAFHAFDNEDIIRFFERLGVALKEEDHGRMFPVSNSARSVAEAMIQRMEKLGVKIYMQTAVKQVDYEDGHVKGVTLKDGQEISASAVIVAVGGKSVPRTGSTGDGYAWAKKAGHTITELYPTEVPITSSEPFIKQKVLQGTSLRDVSLSVLNAKGKPIITHQMDMIFTHFGVSGPAALRCSMFVLRELKKTGAGTVKMRLDLFPNVSAAELSKDVYKLLEENPKKALKNSLSSLLQEKMLLFLLEKADLEETAEYKQVSPKKIEQFIQLLKDFTFEVNGTLDFEKAFVTGGGVSVKEIKPKEMQSKLMEGLFFCGEILDINGYTGGYNITCALVTGHTAGAYAAEVSNA |
| 3V76 Chain:A ((46-414)) | --------------------AGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPR--NFLSGNPHFCKSALARYRPQDFVALVERHGIGWHEKTLGQLF-CDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFR-VTTSAGT-VDAASLVVASGGKSIPKMGATGLAYRIAEQFGLPVVETRPALVPLT----LDQAQLAKLGALAGVAADAEARFGKAAFREA--VLITHRGLSGPAILQISSY-WREGE-------EIVLRLMPDIDIASILKGMRR---ANGRQAVQTALADILPRRLAQFFADEAKLTGRM-LADLSDKTIDALASSIQVWAVKPAGSEGYRTAEVTLGGVDTRALDSRTMQAKEVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAG--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V76.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177832 for 3060 contacts (-58.1/contact) +
2D Compatibility (PS) -39892 + (NN) -12457 + (LL) 2940
1D Compatibility (HY) -25600 + (ID) 5600
Total energy: -258441.0 ( -84.46 by residue)
QMean score : 0.465
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