Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQIDKQKIADAVKVILEAVGENPDREGLIDTPMRVARMYEEVFAGLKKDPS-VHFDTIFEEQHEELVLVKDIRFSSMCEHHLVPFFGVAHVAYLPQNGRVAGLSKLARVVDDVSRRPQLQERITTTVAEIMMEKLKPLGVMVIMEAEHMCMTIRGVNKPGTKTITSAVRGAFKNDDKLRSEVLALIKHN
1WPL Chain:A ((45-229))
--ELNLPNLAAAYSSILRSLGEDPQRQGLLKTPWRAATAMQFFTKGYQETISDVLNDAIFDEDHDEMVIVKDIDMFSMCEHHLVPFVGRVHIGYLP-NKQVLGLSKLARIVEIYSRRLQVQERLTKQIAVAITEALQPAGVGVVIEATHMCMVMRGVQKMNSKTVTSTMLGVFREDPKTREEFLTLIR--
General information:
TITO was launched using:
RESULT:
Template:
1WPL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107612 for 1377 contacts (-78.1/contact) +
2D Compatibility (PS) -20227 + (NN) -7624 + (LL) 396
1D Compatibility (HY) -18400 + (ID) 4550
Total energy: -158017.0 ( -114.75 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_1WPL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WPL-query.scw
PDB file :
Tito_Scwrl_1WPL.pdb
: