Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKKICIAIDGPAAAGKSTVAKIVAKKLRFVYIDTGAMYRAVTYIALKNNIAYEDEKAIAALLQKTVIRF--EPGEVQQVFVGSENVTEVIRSIEVTNHVSIVAAHPSIREALQERQQVFATEGG-IVMDGRDIGTAVLPNAELKIFLLASVEERAERRYKENMAKGFTGDLDQLKKEIEERDHLDYTRTHSPLKKADDAIEVDTTSMSIDQVANKILSLAELKINN
3R20 Chain:A ((9-224))
---SLVVAVDGPAGTGKSSVSRGLARALGARYLDTGAMYRIATLAVLRAGADLTDPAAIEKAAADAEIGVGSDP-DVDAAFLAGEDVSSEIRGDAVTGAVSAVSAVPAVRTRLVDIQRKLATEGGRVVVEGRDIGTVVLPDADVKIFLTASAEERARRRNAQNVANGLPDDYATVLADVQRRDHLDSTRPVSPLRAADDALVVDTSDMDQAQVIAHLLDL-------
General information:
TITO was launched using:
RESULT:
Template:
3R20.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131052 for 1703 contacts (-77.0/contact) +
2D Compatibility (PS) -23358 + (NN) -12567 + (LL) 684
1D Compatibility (HY) -13200 + (ID) 4800
Total energy: -184293.0 ( -108.22 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_3R20.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R20-query.scw
PDB file :
Tito_Scwrl_3R20.pdb
: