Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEQVRVLVVDDEDRIRRLLKMYLERENYRIEEASDGDQALSMALNNNYEVILLDLMMPGKDGIEVCRELREFKSTPVVMLTAKGEEANRVQGFEVGADDYIVKPFSPREVVLRVKAVLRRAKQSSEESAGGTPGDIITFPHLKIDNEAHRVIVDG-KEIGLTPKEYDLLYYLAKSPDKVFDRESLLKEVWRYEFFGDLRTIDTHVKRLREKLHDVSEDAA--RMIVTVWGLGYKFEVPED
4KFC Chain:A ((6-225))
------VLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRR------HS---APDPLVKFSDVTVDLAA-RVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKL---EQDPARPRHFITATGIGYRF-----
General information:
TITO was launched using:
RESULT:
Template:
4KFC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108517 for 1591 contacts (-68.2/contact) +
2D Compatibility (PS) -23307 + (NN) -10780 + (LL) 1260
1D Compatibility (HY) -18000 + (ID) 4100
Total energy: -163444.0 ( -102.73 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_4KFC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KFC-query.scw
PDB file :
Tito_Scwrl_4KFC.pdb
: