Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAIKVESLTKNYHKKRAIENVDLSVNEGELYGFIGPNGAGKSTTIKVLLNFIYATSGGATILGKDVVKDSAEIKKMVGYVPSEVRYYPQMTA--NDIIHYAAKFHHIENATQKMNKYYEMFSI-----DPKKRFGEMSLGNKKKVAIVAGLITEPQLFILDEPTNGLDPLMQHYLFKEMTERNKE-GMTIFLSSHNLREVQEYCTRAAFIRNGNIIAV-----------EDIANQQMTGKVIALKGTNL-PLEKLTNAGARIIEKEMGKARLIFDDDIKTILPLLQEKEITDLTITNQELEDKFMTLYEGGEIK |
| 4YER Chain:A ((6-302)) | ---IVVENLVKKFGDFEAVKGVSFSVKKGEIFAFLGPNGAGKTTTIHMLTTLLKPTSGKAWVAGHDVLKEPREVRRKIGIVFQDQSLDRELTAYENMYIHGKIYGYGGEKLKKRILELLEFVELLEFKDKPVKTF---SGGMARRLEIARSLIHEPEVLFLDEPTIGLDPHTRAHMWEYISKMKKEHNMTIFLTTHYMDEAEQLADRVAIIDHGKIIALGTPTELKRMVGKEIIYVR----------DFIESCRKLPDGRLELNVED-----------------------IEEITYHKPTLNDVFLHL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 34332 for 1739 contacts (19.7/contact) +
2D Compatibility (PS) -23795 + (NN) 6285 + (LL) 3948
1D Compatibility (HY) 6800 + (ID) 1550
Total energy: 26020.0 ( 14.96 by residue)
QMean score : 0.036
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