Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVTYKITSLAGDGIGPEIMTSGLQVLEAVAKKYNHTFEIESHPFGGAGIDVAQDPIPSSTLKACQDADAILLGAIGGPKWDNAP--KRPE-DGLLALRKALGLFANIRPIQVPSSITHLSPLKKEIV-ENTDFVVVRELTGGLYFGEPKHWDESAAVDSLTYTRAEIERIIEKAFEIAATRNKKVTSVDKANVLASSKLWRKIAEEVASRHPDITLEHLYIDAAAMLMIQRPTTFDVIVTENLFGDILSDEASVITGSLGMLPSASHAENGPSLYEPIHGSAPDIANQNIANPMSMISSVSMMLRQSFSLFKEADAIDAAATRTMQAGFLTADLGGN----TTTTDFTNEVLKQIEGGE
1VLC Chain:A ((14-363))---KIAVLPGDGIGPEVVREALKVLEVVEKKTGKTFEKVFGHIGGDAIDRFGEPLPEETKKICLEADAIFLGSVGGPKWDDLPPEKRPEIGGLLALRKMLNLYANIRPIKVYRSLVHVSPLKEKVIGSGVDLVTVRELSYGVYYGQPRGLDEEKGFDTMIYDRKTVERIARTAFEIAKNRRKKVTSVDKANVLYSSMLWRKVVNEVAREYPDVELTHIYVDNAAMQLILKPSQFDVILTTNMFGDILSDESAALPGSLGLLPSASFGDK--NLYEPAGGSAPDIAGKNIANPIAQILSLAMMLEHSFGMVEEARKIERAVELVIEEGYRTRDIAEDPEKAVSTSQMGDLICKKLE---


General information:
TITO was launched using:
RESULT:

Template: 1VLC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165978 for 3009 contacts (-55.2/contact) +
2D Compatibility (PS) -37188 + (NN) -16996 + (LL) -216
1D Compatibility (HY) -34400 + (ID) 8950
Total energy: -263728.0 ( -87.65 by residue)
QMean score : 0.553

(partial model without unconserved sides chains):
PDB file : Tito_1VLC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VLC-query.scw
PDB file : Tito_Scwrl_1VLC.pdb: