Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKQKEQLSVEVARLYYQADLGQQEIATRLGVSRPTVSRLLQNAKTKGYVKIEVQDPFSNLTELAVALKEKYQLKNVTVAFSQTNDYSEITKQISQSAAEYLEEIIHDGDILGVSWGTTMYKIAQKLSPLKA--EIKVVQLKGGVSHSDVNTYAAETLALFGAAYDTAPVS---LPLPVVLDNPLAKQMVEADRHIKNIIELGKKANIAIFTVGTV--RDEALLFRLGYFSDQEKARLKEK-AVGDICSRFFTIDGEIADE-KMDERTIGINLQELKQKETAILVAGGERKIKAIHGALRGGYANHFITDQFTAKQLLEQNFIN |
| 4L5J Chain:A ((16-317)) | ---EEEQVA-RIAWFYYHDGLTQSEISDRLGLTRLKVSRLLEKGHQSGIIRVQINSRFEGCLEYETQLRRQFSLQHVRVIPGLAD--ADVGGRLGIGAAHMLMSLLQPQQMLAIGFGEATMNTLQRLSGFISSQQIRLVTLSGG-----VGSY------MTGIGQLNAACSVNIIPAPLRASSADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDDATIIRSGYISQGEQLMIGRKGAVGDILGYFFDAKGDVVTNIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGYINALVTDQDTAAAILR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156535 for 2411 contacts (-64.9/contact) +
2D Compatibility (PS) -32137 + (NN) -11254 + (LL) 1568
1D Compatibility (HY) -25200 + (ID) 4600
Total energy: -228158.0 ( -94.63 by residue)
QMean score : 0.579
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