Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSILMNQAIQAFLLEDIGQYDLSAGTVFPRDTMGEGVFLAKETGILCGISIPPKVYELLGGNIQFEAYKKDGDWVQKGDIIAAVKAPVRTLLSGERVILNLMQRMSGIASQTNFAIKQLDDSAIRICDTRKTAPGLRAFDKYAVQTGGGFNHRNGLYDGVMLKDNHIAFSGGITSAVSTVRGKLGHMVKIEVETETAEQVKEAVQAGADIIMFDNRTPEEIKQLVKLVPPHITTEISGNVTLENIHRYKGSGANYISLGSLTHSVRAFDISFNSKGGIKA
3TQV Chain:A ((18-283))
----IVTRLVRESLAEDIATGDITAQLAEDIDTTA--FCITREEMILCGQDFANEVINQLDKNIQITWLYSDAQKVPANARIFELKGNVRSILTAERTILNFIQMLSGTATVTNKLVKLISQYKTKLLDTRKTIPGFRLAQKYAVRCGGGFNHRIGLFDAYLIKENHI----GIAKAVTKAK-KLDSNKVVEVEVTNLDELNQAIAAKADIVMLDNFSGEDIDIAVSIARGKVALEVSGNIDRNSIVAIAKTGVDFISVGAITKHIKAIDLSL--------
General information:
TITO was launched using:
RESULT:
Template:
3TQV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -164645 for 2120 contacts (-77.7/contact) +
2D Compatibility (PS) -29016 + (NN) -12297 + (LL) 164
1D Compatibility (HY) -20000 + (ID) 4800
Total energy: -230594.0 ( -108.77 by residue)
QMean score : 0.394
(partial model without unconserved sides chains):
PDB file :
Tito_3TQV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQV-query.scw
PDB file :
Tito_Scwrl_3TQV.pdb
: