Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLSNKFKSFFFLDEEEEYYEEEVAREPEPMQKKTKKEKPNKNRFYAVEEDDAKVVSMQGAQFSSRMVLAEPRVYAEAQELADYLKEYKSVVVNLQRISHDQATRIVDFLSGTVYALGGDIQRVGNNIFLCTPDNVEVDGSISEMLDEQNFM
3CT9 Chain:A ((7-67))
-----------------------------------------------------------------------PTMTAEAVSLLKSL-------ISIPSISREE-TQAADFLQNYIEAEGMQTGRKGNNVWCLSP-------------------
General information:
TITO was launched using:
RESULT:
Template:
3CT9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23134 for 277 contacts (-83.5/contact) +
2D Compatibility (PS) -5946 + (NN) -3618 + (LL) 7328
1D Compatibility (HY) -2000 + (ID) 950
Total energy: -28320.0 ( -102.24 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_3CT9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CT9-query.scw
PDB file :
Tito_Scwrl_3CT9.pdb
: