Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVIAGERKGHALKAVPGNNTRPTTDKVKESLFSIIGPFFD--GDMVLDLFAGSGGLGIEALSRGAERAVFIDQAALAIKTIRQNLEGCHFTERAEVYRNDAERALKLLHKNEWKFDLIFLDPPYKKQQLEKLIGTLEKLELVNENGRIICEHDKEAIMPDTIGKFEKIKSVSYGITVLSIFEFQEA
3P9N Chain:A ((4-124))
-RIIGGVAGGRRI-AVPPRG---TTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSG-ATLRRGAVAAVVAAGTTS--PVDLVLADPPYN-------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3P9N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32348 for 874 contacts (-37.0/contact) +
2D Compatibility (PS) -12545 + (NN) -4500 + (LL) 5768
1D Compatibility (HY) -8400 + (ID) 2350
Total energy: -54375.0 ( -62.21 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_3P9N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P9N-query.scw
PDB file :
Tito_Scwrl_3P9N.pdb
: