Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LLKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAITK
3NX6 Chain:A ((3-93))
-IKPLHDRVVVKPI-------------------STKGEVVAIGAGKPLDNGSLHAPVVKVGDKVIYGQYAGSSYKSEGVEYKVLREDDILAV--
General information:
TITO was launched using:
RESULT:
Template:
3NX6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28104 for 482 contacts (-58.3/contact) +
2D Compatibility (PS) -7762 + (NN) -1434 + (LL) 1512
1D Compatibility (HY) -6800 + (ID) 1650
Total energy: -44238.0 ( -91.78 by residue)
QMean score : 0.613
(partial model without unconserved sides chains):
PDB file :
Tito_3NX6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NX6-query.scw
PDB file :
Tito_Scwrl_3NX6.pdb
: