Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYTITLNPAIDRLLFIQGELEKRKTNRVKKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSDNLDKLYAILKEKHINHDFLVEAGTSTRECFVVLSDDTNGSTMIPEAGFTVSQTNKVNLLKQIAKKVKKEDMVVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSGEYLNLAVEMGVDFIKPNEDEVIAILDEKTNSLEENV---RKLAEK-IPYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMNMPITETLKVATGCSASKVMQQDSSSFDLEAAGKLKNQVSIIQLEER |
| 2JG5 Chain:A ((1-304)) | MIYTVTFNPSIDYVIFTN-DFKIDGLNRATATYKFAGGKGINVSRVLKTLDVESTALGFAGGFPGKFIIDTLNNSAIQSNF-IEVDEDTR---INVKLKTGQETEINAPGPHITSTQFEQLLQQI-KNTTSEDIVIVAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAEKELAESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIVSLGGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASGLSIEKAFQQAVACGTATAFDEDLATRD--AIEKIKSQVTISVLD-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JG5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142648 for 2664 contacts (-53.5/contact) +
2D Compatibility (PS) -31967 + (NN) -10889 + (LL) 924
1D Compatibility (HY) -15600 + (ID) 4700
Total energy: -204880.0 ( -76.91 by residue)
QMean score : 0.453
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