Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIPFIIQYVKSTLGPTAIFEGRKVLKFWQMVIVFIFLNALLLLPVSAHFANQSSFDLPSLMPKMATLGTDQLASKISGLTLENGALTDKNAHI-VEKTVNGVAGVNLTKAELSGA---KNVINFKDQEMTLTDASGYNFEVSYPKDATLSEITSGESLVDWVSAQWYLENQAFVFLSMVLMIGSIIFVSSLMLTVFTTLFIWMTKRSSFSSIASFKESVNLTLNALGIPVIAACIIGFIYFDITIIMAVQSLGMVLMIAWTFLKTRFYKTSEKSMAASR |
| 5A1U Chain:G ((762-874)) | ----------------------------------------------------NQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPHDFANIKANVKVASTENGIIFGNIV-YDVSGAASDRNCVVLSDIHIDIMD---------YIQPAT---CTDAEFRQMWAEFEW--ENKVTVNTNM----------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A1U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6307 for 579 contacts (10.9/contact) +
2D Compatibility (PS) -11064 + (NN) 6714 + (LL) 16696
1D Compatibility (HY) -5200 + (ID) 350
Total energy: 13103.0 ( 22.63 by residue)
QMean score : 0.041
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