Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIIGIAACTSGIAHTYIAKEKLTKAGLALGHNVHIETQGTIGIEDELSAEQVKNADVVIIAADIKISGKDRFKGKRVVEIPTDLAIKAPKQIINKIDKEINN
2KYR Chain:A ((5-103))
--LIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAVTPEDNERFESRDVYEITLQDAIKNAAGIIKEIEEMI--
General information:
TITO was launched using:
RESULT:
Template:
2KYR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64124 for 828 contacts (-77.4/contact) +
2D Compatibility (PS) -10285 + (NN) -1813 + (LL) -32
1D Compatibility (HY) -8800 + (ID) 1750
Total energy: -86804.0 ( -104.84 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_2KYR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KYR-query.scw
PDB file :
Tito_Scwrl_2KYR.pdb
: