Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKYQLVIVGYG-GMGSYHVTLASAADNLEVHGVF--DILEEKREAAAEKGLKIYESFEAVLADEKVDAVLIATPNDSHKELAITALEAGKHVVCEKPVTMTSEDLLAIMDVAKKVNKHFMVHQNRRWDEDFLIIKEIFEQKTIGEMFHLESRVHGANGIPGDWRHLKAHGGGMVLDWGVHLLDQLLFLVDSNVKSVSANLSFALGDEVDDGFVTFITFENGITAQIEVGTTNFIKLPRWYVKGTEGTGIIHDWDLSGEIVQPTALAKTS---EPTPIKAGQGLTKTMAPPSEEATNTLSLPAPAKLAPSFYNNFIDVLNNTSEPIVQNEEVYQVLKLIEAIFEAAETNRTIHSI |
| 3HNP Chain:A ((7-338)) | -------FIGFGKSANRYHLPYLKTRNNIKVKTIFVRQINEELAAPYEERGVYFTTDLDELLNDKEIQVVTICTPAHTHYELAKKVILAGKSVIVEKPFCDTVEHAKELLALGREKGVVVMPYQNRRFDGDFLAVKQVVEQGFLGDIIEIESHIDYFR--PGSITHEAPKEEGSFYSLGIHTMDRMISLFGRPNTVTYDIRNNEVEGAVDNYFDVGLHYGNQLKIKLKTNHIVAKDYPRFIVHGTNGSFIKYGEDQQENDLKAGIMPESAGFGEDSPMYYGIAKYRNANGDWIEK----QIKTPLGDYGRFYDAAYDTIVNGAPKLVKDEEAVTNIEILENGFAA---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3HNP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -151842 for 2601 contacts (-58.4/contact) +
2D Compatibility (PS) -34751 + (NN) -14481 + (LL) 1944
1D Compatibility (HY) -16800 + (ID) 4050
Total energy: -219980.0 ( -84.58 by residue)
QMean score : 0.469
|
|
|