Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVTLYTSPSCTSCRKARAWLEEHDIPYKERNIFSEPLSLDEIKEILRMTEDGTDEIISTRSKTFQKLNV--DLDSLPLQQLFELIQKNPGLLRRPIIIDEKRLQVGYNEDEIRRFLPRRVRTYQLREAQKMVN
2M46 Chain:A ((1-113))
MIKFYQYKNCTTCKKAAKFLDEYGVSYEPIDIVQHTPTINEFKTIIANTGVEINKLFNTHGAKYRELDLKNKLQTLSDDEKLELLSSDGMLVKRPLAVMGDKITLGFKEDQYK--------------------
General information:
TITO was launched using:
RESULT:
Template:
2M46.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54681 for 777 contacts (-70.4/contact) +
2D Compatibility (PS) -11985 + (NN) -5005 + (LL) 2052
1D Compatibility (HY) -11600 + (ID) 1350
Total energy: -82569.0 ( -106.27 by residue)
QMean score : 0.652
(partial model without unconserved sides chains):
PDB file :
Tito_2M46.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2M46-query.scw
PDB file :
Tito_Scwrl_2M46.pdb
: