Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQKLIYFLSQTH-IRSAIAEAWAKRLSLSNVKFISGSWHKSKSTPFIAEALNEFAIEPPESLSYSPSSELLADADLIVTIYDSAHETAPKFPANIQEKIIYWDIDDPEQEIALPQKWASYQEVCDNIALSVKNLEHVLIEA
1JF8 Chain:A ((2-129))
-DKKTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIETHGVNPKAIEAMKEVDIDISNHTSDLIDNDILKQSDLVVTLCSDADNNCPILPPNVKKE--HWGFDDP-----AGKEWSEFQRVRDEIKLAIEKFK------
General information:
TITO was launched using:
RESULT:
Template:
1JF8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64600 for 1011 contacts (-63.9/contact) +
2D Compatibility (PS) -14036 + (NN) -9322 + (LL) 2156
1D Compatibility (HY) -8800 + (ID) 1850
Total energy: -96452.0 ( -95.40 by residue)
QMean score : 0.622
(partial model without unconserved sides chains):
PDB file :
Tito_1JF8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JF8-query.scw
PDB file :
Tito_Scwrl_1JF8.pdb
: