Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNSDIIVADFWKNNEEILTDFDKDSFCESWTENEMWSIEFKVAQTPKNAHCYSFLDYESSVYFRGQEFVVKQLSHDAVGKTLSKDIRAPHIYYTCQDGRQDDAITGSFTLEQCLTHIFKTDNRG---FSWEIIDPSNILEKVQQENFGNNNYLTLIDQLLDDYGVVVIPDNRHLVFKPREIYGAKTENFIRYKYNTDEASFDIDTLSLKTKIKGYGKVDSNGNNYFSPITYTSPEVEKWGIRWQEPVSDERYTVAGNMQRRLKLELQDYPATTGSVILKNDYECEKGDYVLFIYEPLGIDYDVQIVAYKKYPFTIKAPEITLSNNKKSIVSIMAQLAKVLKGAK
4AKI Chain:A ((1294-1431))--------------------------------------------------------------------------YDVVGINFSKDTTTEHILSALH--RHTNYVTTS----KGLTLLPKSDIKNLVLFCDEINLP-------KLDKYGSQNVVLFLRQLMEKQGFWKTPENKWVTIERIHIVGA----------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4AKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26481 for 571 contacts (-46.4/contact) +
2D Compatibility (PS) -10023 + (NN) -1369 + (LL) 16180
1D Compatibility (HY) -5200 + (ID) 1450
Total energy: -28343.0 ( -49.64 by residue)
QMean score : 0.253

(partial model without unconserved sides chains):
PDB file : Tito_4AKI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AKI-query.scw
PDB file : Tito_Scwrl_4AKI.pdb: