Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFILEVGSLADWVSGLATVGALFWAIKLNSNENRKRLTILFRHSFVSKKNGIIISDGKPKV--FIITPVNNSKFSLEINFRQILLVPSLMDRLLFRAEPKKLSNIEALLKQLENKANWQIIKPNLSGEPIMFDYEFIVKQIKKYADGKRFNFAIEIQFIDSTSKIFKHKEKLELRKIKGL
2XNH Chain:A ((110-185))
-------------------------TISCTSLEKEKREEV---HKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQEKKIT-----------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2XNH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24034 for 462 contacts (-52.0/contact) +
2D Compatibility (PS) -8341 + (NN) -7402 + (LL) 9000
1D Compatibility (HY) -6400 + (ID) 1000
Total energy: -38177.0 ( -82.63 by residue)
QMean score : 0.167
(partial model without unconserved sides chains):
PDB file :
Tito_2XNH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XNH-query.scw
PDB file :
Tito_Scwrl_2XNH.pdb
: