Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGIQWIKLSVNMFDDEKIKLLEKMPEGNQMLIVWIRLLALAGKTNDKGRIYLNENVPYTEDMLATLFNRDVGIIRVTLHTLQSFGMIQKTENGLIEIENWEKHQNVDGMERVREQTRKRVEKHREAMRQNRIASGDSKGNKECNVTSSVTVTQSNAIDIDKELDKDINNNNSDLNFKDFWEQNGFGMMLPVELEKLLAWVDDFAGNREIVMKALEVTSEQGAN----KRNYAYVNKILKNWESRGFKTIADV-DAAEKQRQIELEQKYNKPTYNKYNKPVKEEVLPDWFDKDQKQTKQETSTTGSSEDLEKQVAEIKAQLAARNEVQA |
| 2AE2 Chain:A ((16-89)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AE2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12528 for 385 contacts (32.5/contact) +
2D Compatibility (PS) -7546 + (NN) -4057 + (LL) 18056
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: 15881.0 ( 41.25 by residue)
QMean score : 0.547
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