Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNYLSLSEEVKQAKAEGKAIVALESTIISHGMPYPQNVEMARDVEQIIRDNGAVPATIALIDGKIKIGLSDEELELFAKSSNVAKVSRRDIGYLIATKQLGATTVAATMICAELAEIGIFVTGGIGGVHRGAETTMDVSADLEELAKTNVAVVCAGAKSILDLNLTMEYLETKGVPVIGYQTDVLPAFYTRSSDVELTLRADTPEVIAESLKAKWDLQIEGGAVITNPIPEEFAMDEKVINDVIQTALKEAEENHIHGKDVTPFLLGKVKELTDGKSLEANIELVKHNALIGTQIAVAYQNI |
| 4EX8 Chain:A ((17-312)) | --QLLEVSDEIATALAERRPVVALESSLIT----TDPSSETASLIEKAVRGAGAVPATIGIAGGKLVVGLTDSLIERFASTKGIPKISARDIGGALAGGGLGATTVAGTIVIAERAGIQVFTTAGIGGVHRRGEDTLDISPDLLQFRKTKMTVVSGGAKSILDHRLTAEYLETAGVPVYGYRTDKLAAFVVREADVPVT-RMDDLHTAARAAEAHWQVNGPGTVLLTSPIDEQDAVDEAIVEAAIAEALAQCDQEGIVGNAVSPYLMKALARASGGMLPKAGRSLLLSTARVAGEFSAALSAV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4EX8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -195719 for 2623 contacts (-74.6/contact) +
2D Compatibility (PS) -32716 + (NN) -16817 + (LL) 388
1D Compatibility (HY) -20400 + (ID) 6200
Total energy: -271464.0 ( -103.49 by residue)
QMean score : 0.646
|
|
|