Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLQETIGIEIVSVEKGKAVVQLEVTEKVHQPFGYLHGGVSVVLAEHAASIGAAKSIEPDEIV-FGLEINANHLASKQAGLVTATAEAIHIGKSTQVWEIKITDETEKLLCISRCTIAVKKKRK
4QDB Chain:A ((23-137))
----DLLGIRFEAFDDESLTASMPVDSRTHAPFGLLHGGASVVLAESLGSMASYLCVDTSQYYCVGLEVNANHLRGLRSGRVTAVARAIHLGRTTHVWDIRLSGDDGKPSCIARLTMAV-----
General information:
TITO was launched using:
RESULT:
Template:
4QDB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73957 for 838 contacts (-88.3/contact) +
2D Compatibility (PS) -11716 + (NN) 2408 + (LL) 688
1D Compatibility (HY) -9600 + (ID) 2300
Total energy: -94477.0 ( -112.74 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_4QDB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QDB-query.scw
PDB file :
Tito_Scwrl_4QDB.pdb
: