Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVLVIGANGKIGRLLVEKLAMEKGFFV-RAMVRKAEQVSELEKLG--AKPIIADLKK--DFHYAYDEIEA-VIFTAGSGGHTPASETV----------------NIDQNGAIKAIETAKEKGVRRFIIVSSYGADNPENGPESL--AHYLKAKQAADEELKKSGLDYTIVRPVGLSDDPA------TGKIAEVSGKPKTNIPRADVADFISEALSEKSSFYKTYTI----ESGDTPIKQFFN
2Q46 Chain:A ((6-242))
-TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK---EKIGGEADVFIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDF--
General information:
TITO was launched using:
RESULT:
Template:
2Q46.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86548 for 1588 contacts (-54.5/contact) +
2D Compatibility (PS) -23060 + (NN) -17501 + (LL) 512
1D Compatibility (HY) -12800 + (ID) 3500
Total energy: -142897.0 ( -89.99 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_2Q46.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q46-query.scw
PDB file :
Tito_Scwrl_2Q46.pdb
: