Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSALELKNVSFSRKRD-----FEMKNVSASIPEGKITTLIGPNGSGKSTMLRLMMRLLTPDSGEILLNEKNITE--IPSKDLAKKMTMLSQAPE-GLVDVMVHDLVAYGRLPHRSWLSTLQEEDEAVIHWAIKVCNL-EELAYRPLHSLSGGERQRAWLAMALAQKTPILLLDEPTTYLDIAHQLELLDLLVHLNKEYNLTIVLVLHDLNQAAIYSDHVFVCENGQLVKDGSPREVFTTELLRDVFHITADITEKDGKQHIHPLASTRFEY
4MKI Chain:B ((7-236))
----IKVENVSFIYNEGTPYATVALKDINFSIDDEEFVGIIGHTGSGKSTLIQQLNGLLKPSKGKIYINGIDITDKKVSLKDIRKQVGLVFQYPEYQLFEETVFKDIAFG--PSNLGLS--EEEVKERVYEAMEIVGISKELADKSPFELSGGQKRRVAIAGILAMRPKILILDEPTAGLDPKGKQEILNKIKEIHDKYKMITILVSHNMEDIARIADKIIVMNRGKIELIGTPREVF----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4MKI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -159042 for 1769 contacts (-89.9/contact) +
2D Compatibility (PS) -24224 + (NN) -12293 + (LL) 3452
1D Compatibility (HY) -16800 + (ID) 3750
Total energy: -212657.0 ( -120.21 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_4MKI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MKI-query.scw
PDB file :
Tito_Scwrl_4MKI.pdb
: