Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTTETAEKVEYIIETKDVDLFYGSKQALQKIALNIKKNQVTALIGPSGCGKSTFLRTLNRMNDLIPNVKTTGEIHIGGENVQDPKIDMVNLRKKVGMVFQQANPFP-FSIYDNVAYGPRMHGIKDKKVLDEIVERSLRQAALWEEVHDRLDRSAIGMSGGQQQRLCIARVLAVKPDVILMDEPTSALDPISTAKVEDLILELKKD-YTIVIVTHNMQQASRISDETAFFLNGRIVEFADTTSIFTNPAEKETEDYISGRFG
4YMW Chain:J ((1-237))-----------MIFVNDVYKNFGSLEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEE-----PTKGEVFIDGVKINNGKVNINKVRQKVGMVFQHFNLFPHLTAIENITLAPVKVKKMNKKEAEELAVDLLAKVGLL----DKKDQYPIKLSGGQKQRLAIARALAMQPEVMLFDEPTSALDPEMVKEVLNVMKQLANEGMTMVVVTHEMGFAREVGDRVIFMDDGVIVEEGTPEEIFYRAKNERTREFLS----


General information:
TITO was launched using:
RESULT:

Template: 4YMW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -105464 for 1939 contacts (-54.4/contact) +
2D Compatibility (PS) -25966 + (NN) -15929 + (LL) 1852
1D Compatibility (HY) -18800 + (ID) 4550
Total energy: -168857.0 ( -87.08 by residue)
QMean score : 0.458

(partial model without unconserved sides chains):
PDB file : Tito_4YMW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YMW-query.scw
PDB file : Tito_Scwrl_4YMW.pdb: