Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKLSIAYLESLTIKDIYSLAKEHKIAYYSKLTKRELIFALLKSNAEKEGFFFMEGVLEIIPNEGFGFLRPIN--YSSSSEDIYISASQIRRFELRTGDRVSGKVRPPKENERYFGLLHVEAVNGENPEVAKERVHFPGLTPLYPDRQIHLE---TEKYPISTRTIDLIAPIGFGQRGLIVAPPKAGKTVLLKEIANAITTNHPDTELIVLLIDERPEEVTDIERSVKADVVSSTFDEVPENHIKVAELVLERAMRLVEQKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFGAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRQLAERRVFPAIDMRRSGTRKEELLLSKERLEQLWKIRKAMPKQGDGLDISERFVRYLKKTDNNEAFYELLQEEMFKK |
2HT1 Chain:A ((53-376)) | ---------------------------------KQDIIFAILKQHAKSGEDIFGDGVLEIL-QDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRV---------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145528 for 2474 contacts (-58.8/contact) +
2D Compatibility (PS) -34387 + (NN) -15618 + (LL) 8840
1D Compatibility (HY) -34400 + (ID) 10050
Total energy: -231143.0 ( -93.43 by residue)
QMean score : 0.413
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